Genetic relationships and diversity analysis in Turkish laurel (Laurus nobilis L.) germplasm using ISSR and SCoT markers

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dc.authorid0000-0001-9991-1792en_US
dc.authorid0000-0003-0547-9527en_US
dc.contributor.authorYılmaz, Abdurrahim
dc.contributor.authorÇiftçi, Vahdettin
dc.date.accessioned2023-05-12T07:39:42Z
dc.date.available2023-05-12T07:39:42Z
dc.date.issued2021en_US
dc.departmentBAİBÜ, Ziraat Fakültesi, Tarla Bitkileri Bölümüen_US
dc.descriptionThis study was produced from the doctoral dissertation number 620825 conducted at the Bolu Abant zzet Baysal University Institute of Science. The authors express their gratitude to the BAP (Institution of Scientific Research Projects-Bolu Abant Izzet Baysal University) for their support. The authors are thankful to Associate Prof. Dr. Faheem Shahzad BALOCH, Assistant Prof. Dr. Muhammad Azhar NADEEM, and Dr. Emrah GULER for assistance in the experiments.en_US
dc.description.abstractLaurel (Laurus nobilis L.) has been used in the Mediterranean basin since ancient ages. Nowadays, Turkey, Mexico, Portugal, Italy, Spain, France, Algeria, and Morocco use aromatic leaves for commercial purposes, and Turkey is the largest exporter in the world. In this study, molecular characterization, and genetic relationships of 94 Turkish laurel genotypes were determined by ISSR and SCoT markers. The experiment was conducted with 16 ISSR and 10 SCoT markers. While 348 of 373 bands were polymorphic with a 93.3% polymorphism rate, Nei's genetic distances ranged between 0.17 and 0.70 with 0.39 mean in ISSR. In SCoT, 175 of 227 bands were polymorphic with 77.1% polymorphism rate, and Nei's genetic distances varied between 0.12 and 0.51. Sufficient genetic diversity determined with diversity parameters consisting of the average Shannon's information index (ISSR: 0.46, SCoT:0.35), the overall gene diversity (ISSR:0.19, SCoT:0.18), and the effective number of alleles (ISSR:1.52, SCoT:1.38). AMOVA (Analysis of molecular variance) revealed most of the variation was within genotypes (96%). Neighbor-joining algorithms, principal coordinate analysis (PCoA), and model-based structure resulted in harmony and clustered according to the geographical regions and provinces they collected. Genotypes were divided into two groups in ISSR and SCoT with UPGMA clustering resulting in a similar polymorphism distribution. The correlation coefficient (r) determined by marker systems' Nei's genetic distances was 0.25. The results of the study put forward resources for advanced breeding techniques, contribute to the preservation of genetic diversity, and management of genetic resources for the breeders.en_US
dc.description.sponsorshipBAP (Institution of Scientific Research Projects-Bolu Abant Izzet Baysal University); Bolu Abant zzet Baysal University Institute of Science [620825]en_US
dc.identifier.citationYilmaz, A., & Ciftci, V. (2021). Genetic relationships and diversity analysis in Turkish laurel (Laurus nobilis L.) germplasm using ISSR and SCoT markers. Molecular Biology Reports, 48, 4537-4547.en_US
dc.identifier.doi10.1007/s11033-021-06474-y
dc.identifier.endpage4547en_US
dc.identifier.issn0301-4851
dc.identifier.issn1573-4978
dc.identifier.issue5en_US
dc.identifier.pmid34148209en_US
dc.identifier.scopus2-s2.0-85108300472en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage4537en_US
dc.identifier.urihttp://dx.doi.org/10.1007/s11033-021-06474-y
dc.identifier.urihttps://hdl.handle.net/20.500.12491/10872
dc.identifier.volume48en_US
dc.identifier.wosWOS:000663697200002en_US
dc.identifier.wosqualityQ4en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.indekslendigikaynakPubMeden_US
dc.institutionauthorYılmaz, Abdurrahim
dc.institutionauthorÇiftçi, Vahdettin
dc.language.isoenen_US
dc.publisherSpringeren_US
dc.relation.ispartofMolecular Biology Reportsen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectLaurelen_US
dc.subjectPopulation Structureen_US
dc.subjectMorphological Traitsen_US
dc.subjectPopulation-Structureen_US
dc.subjectAccessionsen_US
dc.subjectDNAen_US
dc.subjectTurkeyen_US
dc.subjectLaurus Nobilis L.en_US
dc.titleGenetic relationships and diversity analysis in Turkish laurel (Laurus nobilis L.) germplasm using ISSR and SCoT markersen_US
dc.typeArticleen_US

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