Genetic characterization of rheum ribes (wild rhubarb) genotypes in lake Van basin of Turkey through Issr and ssr markers

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dc.authorid0000-0003-1233-0077en_US
dc.authorid0000-0002-0637-9619en_US
dc.authorid0000-0002-7470-0080en_US
dc.contributor.authorEkincialp, Aytekin
dc.contributor.authorErdinç, Çeknas
dc.contributor.authorTuran, Sibel
dc.contributor.authorÇakmakçı, Özlem
dc.contributor.authorNadeem, Muhammad Azhar
dc.contributor.authorBaloch, Faheem Shehzad
dc.contributor.authorŞensoy, Suat
dc.date.accessioned2021-06-23T19:52:47Z
dc.date.available2021-06-23T19:52:47Z
dc.date.issued2019
dc.departmentBAİBÜ, Lisansüstü Eğitim Enstitüsü, Fen Bilimleri, Tarla Bitkileri Ana Bilim Dalıen_US
dc.description.abstractRheum ribes L. (wild rhubarb) is one of the less known plants to the world and the only species from the Rheum genus present in Turkey. In this study, one R. rhabarbarum (as check genotype) and 80 R. ribes genotypes were collected from different geographical locations of Turkey for the investigation of diversity and genetic structure using ISSR (Inter Simple Sequence Repeat) and SSR (Simple Sequence Repeats) markers. SSR markers reflected higher (100%) polymorphism as compared to the ISSR marker. However, ISSR markers produced higher average Polymorphism Information Content (PIC) value (0.805) than the SSR markers (0.724). A Similar range of (PIC) values with ISSR markers was found greater (0.935-0.395) as compared to the range of SSR makers (0.88-0.47). Using Jaccard similarity index, genetic distance was measured for both markers and average genetic distance was found to be higher with ISSR markers as compared to the SSR markers. Neighbor-joining analysis clustered genotypes into 3 groups for both marker systems. During this study some distinct genotypes like R. rhabarbarum, YYUERC19, YYUERCO9 and YYUNIER65 were investigated that can be used as candidate parents for the development of R. ribes L. varieties. Structure analysis grouped the genotypes according to altitude by clustering genotypes having at more than 2000 m in one group and genotypes less than 2000 m altitude in another group. Genetic variations observed in this study can be applied to investigate various traits of interest for the R. ribes L. breeding. (C) 2019 Friends Science Publishersen_US
dc.identifier.doi10.17957/IJAB/15.0958
dc.identifier.endpage802en_US
dc.identifier.issn1560-8530
dc.identifier.issn1814-9596
dc.identifier.issue4en_US
dc.identifier.scopus2-s2.0-85062674639en_US
dc.identifier.scopusqualityQ3en_US
dc.identifier.startpage795en_US
dc.identifier.urihttps://www.webofscience.com/wos/woscc/full-record/WOS:000460429600011
dc.identifier.urihttps://hdl.handle.net/20.500.12491/10205
dc.identifier.volume21en_US
dc.identifier.wosWOS:000460429600011en_US
dc.identifier.wosqualityQ3en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.institutionauthorBaloch, Faheem Shehzad
dc.institutionauthorNadeem, Muhammad Azhar
dc.language.isoenen_US
dc.publisherFriends Science Publen_US
dc.relation.ispartofInternational Journal Of Agriculture And Biologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectRheum ribes L.en_US
dc.subjectGenetic diversityen_US
dc.subjectISSRen_US
dc.subjectSSRen_US
dc.subjectTurkeyen_US
dc.titleGenetic characterization of rheum ribes (wild rhubarb) genotypes in lake Van basin of Turkey through Issr and ssr markersen_US
dc.typeArticleen_US

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