Characterization of cellulose synthase A (CESA) gene family in eudicots

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dc.authorid0000-0002-2098-7899en_US
dc.authorid0000-0002-7470-0080en_US
dc.authorid0000-0002-0489-3884en_US
dc.authorid0000-0001-9901-7555en_US
dc.contributor.authorNawaz, Muhammad Amjad
dc.contributor.authorLin, Xiao
dc.contributor.authorChan, Ting-Fung
dc.contributor.authorImtiaz, Muhammad
dc.contributor.authorRehman, Hafiz Mamoon
dc.contributor.authorBaloch, Faheem Shehzad
dc.date.accessioned2021-06-23T19:51:55Z
dc.date.available2021-06-23T19:51:55Z
dc.date.issued2019
dc.departmentBAİBÜ, Ziraat Fakültesi, Tarla Bitkileri Bölümüen_US
dc.description.abstractCellulose synthase A (CESA) is a key enzyme involved in the complex process of plant cell wall biosynthesis, and it remains a productive subject for research. We employed systems biology approaches to explore structural diversity of eudicot CESAs by exon-intron organization, mode of duplication, synteny, and splice site analyses. Using a combined phylogenetics and comparative genomics approach coupled with co-expression networks we reconciled the evolution of cellulose synthase gene family in eudicots and found that the basic forms of CESA proteins are retained in angiosperms. Duplications have played an important role in expansion of CESA gene family members in eudicots. Co-expression networks showed that primary and secondary cell wall modules are duplicated in eudicots. We also identified 230 simple sequence repeat markers in 103 eudicot CESAs. The 13 identified conserved motifs in eudicots will provide a basis for gene identification and functional characterization in other plants. Furthermore, we characterized (in silico) eudicot CESAs against senescence and found that expression levels of CESAs decreased during leaf senescence.en_US
dc.identifier.doi10.1007/s10528-018-9888-z
dc.identifier.endpage272en_US
dc.identifier.issn0006-2928
dc.identifier.issn1573-4927
dc.identifier.issue2en_US
dc.identifier.pmid30267258en_US
dc.identifier.scopus2-s2.0-85054306103en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage248en_US
dc.identifier.urihttps://doi.org/10.1007/s10528-018-9888-z
dc.identifier.urihttps://hdl.handle.net/20.500.12491/10070
dc.identifier.volume57en_US
dc.identifier.wosWOS:000463638800005en_US
dc.identifier.wosqualityQ3en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.indekslendigikaynakPubMeden_US
dc.institutionauthorBaloch, Faheem Shehzad
dc.language.isoenen_US
dc.publisherSpringer/Plenum Publishersen_US
dc.relation.ispartofBiochemical Geneticsen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectCell Wallen_US
dc.subjectCellulose Synthase-Aen_US
dc.subjectEudicotsen_US
dc.subjectPhylogenetic Constructionen_US
dc.subjectComparative Co-expressionen_US
dc.subjectSenescenceen_US
dc.titleCharacterization of cellulose synthase A (CESA) gene family in eudicotsen_US
dc.typeArticleen_US

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