Genome-wide identification and expression analysis of MTP (Metal Ion Transport Proteins) genes in the common bean

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dc.authorid0000-0001-9138-3382en_US
dc.authorid0000-0002-3385-2520en_US
dc.authorid0000-0002-7470-0080en_US
dc.contributor.authorYılmaz, Hilal
dc.contributor.authorÖzer, Göksel
dc.contributor.authorBaloch, Faheem Shehzad
dc.contributor.authorÇiftçi, Vahdettin
dc.contributor.authorChung, Yong Suk
dc.contributor.authorSun, Hyeon-Jin
dc.date.accessioned2024-06-26T11:18:26Z
dc.date.available2024-06-26T11:18:26Z
dc.date.issued2023en_US
dc.departmentBAİBÜ, Ziraat Fakültesi, Bitki Koruma Bölümüen_US
dc.descriptionThis study was part of the doctoral dissertation of Hilal YILMAZ. All authors thank the BAIBU Scientific Research Project Unit and COST action Trace metal metabolism in plants (CA19116) for their financial contributions.en_US
dc.description.abstractMTP/CDF carriers, called metal ion transport proteins, act as substrates for the transmission of micronutrients such as iron (Fe), zinc (Zn), and manganese (Mn) to membrane carriers in plants. In this study, genome-wide analysis of the MTP gene family in the common bean genome, expression analysis of the PvMTP4, PvMTP5, and PvMTP12 genes after Fe and Zn treatments, and the effects of Fe and Zn applications on iron and zinc content were investigated. This study used common bean genotypes assumed to have high or low Fe and Zn accumulation ability. PvMTP genes were defined as containing conserved catalytic domains with molecular weights and protein lengths ranging from 41.35 to 91.05 kDa and from 369 to 813 amino acids (aa), respectively. As a result of the phylogenetic analysis, three main clusters containing seven subgroups were formed. In this study, the first characterization of the MTP gene family of beans was performed, and the responses of three different PvMTP genes in the Zn-CDF group to Fe and Zn applications were revealed. The obtained findings are thought to constitute pioneering resources for future research on common bean biofortification studies, plant breeding related to Fe and Zn, and the functional characterization of the MTP gene family.en_US
dc.description.sponsorshipThis study was part of the doctoral dissertation of Hilal YILMAZ. All authors thank the BAIBU Scientific Research Project Unit and COST action Trace metal metabolism in plants (CA19116) for their financial contributions. [CA19116]; COST action Trace metal metabolism in plantsen_US
dc.identifier.citationYilmaz, H., Özer, G., Baloch, F. S., Çiftçi, V., Chung, Y. S., & Sun, H. J. (2023). Genome-wide identification and expression analysis of MTP (Metal ion transport proteins) genes in the common bean. Plants, 12(18), 3218.en_US
dc.identifier.doi10.3390/plants12183218
dc.identifier.endpage21en_US
dc.identifier.issn2223-7747
dc.identifier.issue18en_US
dc.identifier.pmid37765382en_US
dc.identifier.scopus2-s2.0-85172759227en_US
dc.identifier.scopusqualityQ1en_US
dc.identifier.startpage1en_US
dc.identifier.urihttp://dx.doi.org/10.3390/plants12183218
dc.identifier.urihttps://hdl.handle.net/20.500.12491/12221
dc.identifier.volume12en_US
dc.identifier.wosWOS:001072608200001en_US
dc.identifier.wosqualityQ1en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.indekslendigikaynakPubMeden_US
dc.institutionauthorÖzer, Göksel
dc.institutionauthorÇiftçi, Vahdettin
dc.language.isoenen_US
dc.publisherMDPIen_US
dc.relation.ispartofPlants-Baselen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectBiofortificationen_US
dc.subjectFeen_US
dc.subjectZnen_US
dc.subjectMTP Gene Familyen_US
dc.subjectGene Expressionen_US
dc.subjectHidden Hungeren_US
dc.titleGenome-wide identification and expression analysis of MTP (Metal Ion Transport Proteins) genes in the common beanen_US
dc.typeArticleen_US

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