Determination of vc and mating types of Cryphonectria parasitica isolates by multiplex PCR and their genetic diversity in 13 chestnut-growing provinces of Turkey

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dc.authorid0000-0002-6269-404Xen_US
dc.authorid0000-0002-3385-2520en_US
dc.authorid0000-0002-5055-1391en_US
dc.authorid0000-0002-7291-4712en_US
dc.contributor.authorÇakar, Deniz
dc.contributor.authorÖzer, Göksel
dc.contributor.authorŞimşek, Seçil Akıllı
dc.contributor.authorMaden, Salih
dc.date.accessioned2023-07-24T10:40:17Z
dc.date.available2023-07-24T10:40:17Z
dc.date.issued2023en_US
dc.departmentBAİBÜ, Ziraat Fakültesi, Bahçe Bitkileri Bölümüen_US
dc.descriptionCankiri Karatekin Universityen_US
dc.description.abstractVegetative compatibility (vc) and mating types and genetic diversity of Cryphonectria parasitica isolates were determined using 183 isolates obtained from 215 infected chestnut trees growing in 13 provinces of Turkey. Based on the cultural aspects, 143 of these isolates were evaluated as virulent whereas the remaining 40 isolates were hypovirulent. When vc types of 183 isolates were classically differentiated, 135 of them matched to EU-1 (82.3%), 29 of them to EU-12 (17.6%) vc type, whereas 19 of them did not match to the two. When molecular vic markers were used, all the isolates were assigned to two EU vc types; 149 to EU-1 (81.4%) and 34 (18.5%) to EU-12. Of the majority of the isolates, 134 (73.2%) had mating-type MAT-1, while 44 (24%) isolates had MAT-2 and 5 (2.8%) isolates had both mating types. The population analysis based on two DNA marker systems, Inter-Primer Binding Site and Start Codon Targeted Polymorphism, showed no intraspecific genetic variation among the C. parasitica isolates. The prevalence of two dominant vc types revealed by this study shows that biological control with hypovirulent EU-1 and EU-12 isolates will be significant for the country. The results might be helpful to chestnut breeders carrying out resistance breeding studies to manage this disease based on hypovirulence attributed to Cryphonectria hypovirus 1.en_US
dc.description.sponsorshipCankiri Karatekin Universityen_US
dc.identifier.citationÇakar, D., Özer, G., Akıllı Şimşek, S., & Maden, S. (2023). Determination of vc and mating types of Cryphonectria parasitica isolates by multiplex PCR and their genetic diversity in 13 chestnut‐growing provinces of Turkey. Forest Pathology, e12813.en_US
dc.identifier.doi10.1111/efp.12813
dc.identifier.endpage10en_US
dc.identifier.issn1437-4781
dc.identifier.issn1439-0329
dc.identifier.issue3en_US
dc.identifier.scopus2-s2.0-85153479785en_US
dc.identifier.scopusqualityQ2en_US
dc.identifier.startpage1en_US
dc.identifier.urihttp://dx.doi.org/10.1111/efp.12813
dc.identifier.urihttps://hdl.handle.net/20.500.12491/11337
dc.identifier.volume53en_US
dc.identifier.wosWOS:000976766500001en_US
dc.identifier.wosqualityQ3en_US
dc.indekslendigikaynakWeb of Scienceen_US
dc.indekslendigikaynakScopusen_US
dc.institutionauthorÖzer, Göksel
dc.language.isoenen_US
dc.publisherWileyen_US
dc.relation.ispartofForest Pathologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectCastanea Sativaen_US
dc.subjectChestnut Blighten_US
dc.subjectGenetic Diversityen_US
dc.subjectiPBSen_US
dc.subjectMultiplex PCR Assaysen_US
dc.subjectSCoTen_US
dc.titleDetermination of vc and mating types of Cryphonectria parasitica isolates by multiplex PCR and their genetic diversity in 13 chestnut-growing provinces of Turkeyen_US
dc.typeArticleen_US

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